Configure Image
 
image width:pixels
label area width:characters
text size:
Display chromosome ideogram above main graphic
Show light blue vertical guidelines, or light red vertical window separators in multi-region view
Display labels to the left of items in tracks
Display description above each track
Show track controls under main graphic
Next/previous item navigation
Next/previous exon navigation
Show exon numbers
Enable highlight with drag-and-select (if unchecked, drag-and-select always zooms to selection)

Configure Tracks on UCSC Genome Browser: Zea mays B73 AGPv4 (zeaMay_b73_v4)
  Tracks:    Groups:
Control track and group visibility more selectively below.
-   Mapping and Sequencing    
Base Position Chromosome position in bases. (Clicks here zoom in 3x)
Short Match Perfect Matches to Short Sequence (TATAWAAR)
-   Genes and Gene Predictions    
Genes (Ensembl) Genes (Ensembl)
GenesSearchable GenesSearchable
-   Experimental Tracks    
1 EARSHOOT DNS 1 DNSca ES v180814zmt [1-2 cm Field Earshoot, DNS=(Light-Heavy) read coverage, Bass@FSU nuprime data]
2 COLEOP NODE DNS 2 DNSca CN v180814zmt [4-5 DAI, coleoptilar node, gh-grown, DNS=(Light-Heavy) normalized read coverage, Bass@FSU nuprime data]
3 ROOT TIP DNS 3 DNSca RT v80814zmt [1 mm Root Tip, DNS=(Light-Heavy) normalized read coverage, Bass@FSU nuprime data]
4 ENDOSPERM DNS 4 DNSca EN v180814zmt (15 DAP Endosperm, DNS=(Light-Heavy) normalized read coverage, Bass@FSU nuprime data]
Core Bin Marker Core Bin Markers
G4v2 ALL G4 motifs G4v2 All Motifs from B73v2 [lifted over from source B73v2, from Andorf et al., JGG, 2014]
G4v2 PATCH G4 motifs G4v2 Patch Motifs [lifted over from source B73v2, from Andorf et al., JGG, 2014]
GC Percent Percent GC in 100bp windows