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Configure Tracks on UCSC Genome Browser: Zea mays B73 AGPv2 (zeaMay_b73_v2)
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-   Mapping and Sequencing    
Base Position Chromosome position in bases. (Clicks here zoom in 3x)
BACs RevGen_v2 Assembly BACs (Maize Genome Sequencing Consortium and the Arizona Genome Institute, March 2010)
Centromere Centromere (Jiang/Presting)
Gaps Gaps in Genome Assembly (Maize Genome Sequencing Consortium and the Arizona Genome Institute)
IBM Markers ISU Integrated IBM2009 Markers (Schnable Lab)
MAGI Maize Assembled Genomic Islands (MAGIs, Schnable Lab)
Segments Segments of Known Genetic Distance
Short Match Perfect Matches to Short Sequence (TATAWAAR)
-   Genes and Gene Predictions    
cDNAs cDNAs (from PlantGDB)
ESTs ESTs (from PlantGDB)
Gene Density Gene Density (1 Mb non-overlapping windows)
Genes Filtered Gene Set (Maizesequence.org)
Genes Filtered Gene Set (Maizesequence.org)
PUTs PlantGDB Unique Transcripts (PUTs)
-   Expression and Regulation    
%GC GC Content
anti-CENH3 ChIP anti-CENH3 ChIP (from Jiang/Presting)
DNA Methylation B73/Mo17 DNA Methylation (Springer Lab)
Nuclease Sensitivity Nuclease Sensitivity, Fixed Scale (MaizeNucleosome.org)
Nucleosomes Nucleosome Occupancy (MaizeNucleosome.org)
-   Variation and Repeats    
Ac/Ds Ac/Ds Insertions (Dooner Lab)
Ac/Ds Ac/Ds Insertions (Brutnell and Vollbrecht, via PlantGDB)
HapMap HapMap (from Panzea)
Low-Copy Seqs Low-Copy Sequences
MIPS Repeats MIPS Repeats (Munich Information Centre for Protein Sequences)
MTEC Repeats TE Consortium repeat annotations
MTEC+LTR Retros TE Consortium Class I repeats, with new LTR exemplars
Mu Insertions Heritable Mu Insertions (Mu-Illumina Group)
Palomero Toluqueno contigs Palomero Toluqueno contigs (CINVESTAV-Langebio)
Reconstructed Chr's Reconstructed Chromosomes from the Maize Tetraploidy (from J. Schnable and M. Freeling)
Sirevirus LTR retros Sirevirus LTR retrotransposon (from the Bioinformatics Analysis Team)
UniformMu UniformMu Insertions (UniformMu Group)