MNase DNS NUCORT Track Settings

Overlay method:

Type of graph:

Track height:

pixels (range: 13 to 200)

Data view scaling:

Always include zero:

Vertical viewing range:

min:

max: (range: 0 to 1.5)

Transform function:

Transform data points by:

Windowing function:

Smoothing window:

pixels

Negate values:

Draw y indicator lines:

at y = 0.0: at y =

List subtracks: only selected/visible all

nuprime CN (cnode) DNS-seq

nuprime core ref tissue (nucort), DNSca CN (CN 4-5 days after planting, 0.5 cm section, B73 spear stage, greenhouse, DNS-seq=[Light- Heavy], FSU nuprime, 2017, zmt-aligned Bowtie2 Oct 2020)

schema

nuprime EN (endo15dap) DNS-seq

nuprime core ref tissue (nucort), DNSca EN (15 DAP Endosperm B73, DNS-seq=[Light- Heavy], FSU nuprime, 2017, zmt-aligned Bowtie2 Oct 2020)

schema

nuprime ES (earshoot) DNS-seq

nuprime core ref tissue (nucort), DNSca ES (1-2 cm Field Grown B73 Earshoot, DNS-seq=[Light- Heavy], FSU nuprime, 2017, zmt-aligned Bowtie2 Oct 2020)

schema

nuprime RT (roottip1mm) DNS-seq

nuprime core ref tissue (nucort), DNSca RT (1 mm Root Tip B73, DNS-seq=[Light- Heavy], FSU nuprime, 2017, supplemented w additional light reads for v180110, zmt-aligned Bowtie2 Oct 2020)

schema

Credits

Methods